Natrinema
| Natrinema | |
|---|---|
Scientific classification  | |
| Domain: | Archaea |
| Kingdom: | Methanobacteriati |
| Phylum: | Methanobacteriota |
| Class: | Halobacteria |
| Order: | Natrialbales |
| Family: | Natrialbaceae |
| Genus: | Natrinema McGenity et al. 1998[1] |
| Type species | |
| Natrinema pellirubrum McGenity et al. 1998 | |
| Species | |
Natrinema (common abbreviation Nnm.) is a genus of archaeans in the family Natrialbaceae.[2]
Taxonomy
As of 2022, there are 18 species validly published in the genus Natrinema.[1]
Natrinema is related to the genus Haloterrigena, established in 1999, resulting in confusion about taxon limits and several species apparently being assigned to the wrong genus.[3] Based on phylogenomic analysis, eight species from Haloterrigena as well as Halopiger salifodinae were transferred to Natrinema in 2022.[4]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[2]
| 16S rRNA based LTP_07_2026[5][6][7] | 53 marker proteins based GTDB 11-RS232[8][9][10] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Note: Unassigned Natrinema
- "N. aidingensis" Liu et al. 2003a
- "N. thermophila" Kim et al. 2018
- "N. xinjiang" Habdin & Tohty 2005
- "N. yunnanense" [Natrinema sp. CY21]
See also
References
- 1 2 3 Natrinema in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 53: D1–D12. doi:10.1093/nar/gkaf1110.
- 1 2 C.L. Schoch. "Natrinema". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2026-08-01.
- ↑ Tindall, B. J. (2003). "Taxonomic problems arising in the genera Haloterrigena and Natrinema". Int. J. Syst. Evol. Microbiol. 53 (Pt 5): 1697–1698. Published online 28 February 2003. doi:10.1099/ijs.0.02529-0. PMID 13130070.
- ↑ de la Haba, Rafael; Minegishi, Hiroaki; Kamekura, Masahiro; Shimane, Yasuhiro; Ventosa, Antonio (2021). "Phylogenomics of Haloarchaea: The Controversy of the Genera Natrinema-Haloterrigena". Frontiers in Microbiology. 12 740909. doi:10.3389/fmicb.2021.740909. PMC 8530250. PMID 34690986.
- ↑ "The LTPlus". The All-Species Living Tree Project. Retrieved 1 August 2026.
- ↑ "LTP_all tree in newick format". The All-Species Living Tree Project. Retrieved 1 August 2026.
- ↑ Rossello-Mora, Ramon; Viver, Tomeu; Palmer-Rodríguez, Pere; Westram, Ralf; Bustos-Caparros, Esteban; Gago, Joan Francisco; Gonzalez-Mendez, Jaime; Llabrés, Mercè; Ludwig, Wolfgang; Amann, Rudolf (22 April 2026). "A pipeline for improved 16S rRNA gene-based phylogeny and diversity analyses of Bacteria and Archaea". Nature Portfolio. doi:10.21203/rs.3.rs-9370187/v1.
- ↑ "GTDB release 11-RS232". Genome Taxonomy Database. Retrieved 1 May 2026.
- ↑ "ar53_r232.sp_label". Genome Taxonomy Database. Retrieved 1 May 2026.
- ↑ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2026.
Further reading
Scientific journals
- Xin H; Itoh T; Zhou P; Suzuki K; et al. (2000). "Natrinema versiforme sp. nov., an extremely halophilic archaeon from Aibi salt lake, Xinjiang, China". Int. J. Syst. Evol. Microbiol. 50 (3): 1297–1303. doi:10.1099/00207713-50-3-1297. PMID 10843075.
- Oren A; Ventosa A (2000). "International Committee on Systematic Bacteriology Subcommittee on the taxonomy of Halobacteriaceae. Minutes of the meetings, 16 August 1999, Sydney, Australia". Int. J. Syst. Evol. Microbiol. 50 (3): 1405–1407. doi:10.1099/00207713-50-3-1405. PMID 10843089.
- McGenity TJ; Gemmell RT; Grant WD (1998). "Proposal of a new halobacterial genus Natrinema gen. nov., with two species Natrinema pellirubrum nom. nov. and Natrinema pallidum nom. nov". Int. J. Syst. Bacteriol. 48 (4): 1187–1196. doi:10.1099/00207713-48-4-1187. PMID 9828420.
- Feng, Jie; Wang, Jian; Du, Xin; Tang, Wei; et al. (Mar 2014). "Proteomic Analysis of the Secretome of Haloarchaeon Natrinema sp. J7−2". Journal of Proteome Research. 13 (3): 1248–1258. doi:10.1021/pr400728x. PMID 24512091.
Scientific books
- Gibbons, NE (1974). "Family V. Halobacteriaceae fam. nov.". In RE Buchanan; NE Gibbons (eds.). Bergey's Manual of Determinative Bacteriology (8th ed.). Baltimore: The Williams & Wilkins Co.